Partnering with America's leading research institutions
Partnering with America's leading research institutions
At MDDB America, we are developing a unified resource to organize and support molecular dynamics data from American research efforts. Building on the initial European nodes that established the infrastructure, the project provides a structured framework for MD data collection and management.
By improving access to these data, we aim to support reproducibility, secondary analysis, and scientific discovery in biochemistry, pharmacology, and personalized medicine.
Our project addresses the need for an integrated platform that enables researchers to store, access, and build upon molecular dynamics data within the U.S. scientific community.
Access the central MDDB repository for comprehensive molecular dynamics data and resources.
Discover the Florida Node, supporting advanced molecular dynamics simulations and data management within the U.S.
Discover the Japan Node, supporting advanced molecular dynamics simulations and data management within Japan.
Building on FAIR data principles for all MD simulation data.
Persistent identifiers and rich metadata enable full discoverability of all simulation datasets.
Data retrievable via standardized, open, universally implementable protocols and APIs.
Formal shared vocabularies supporting integration with the broader life sciences data ecosystem.
Rich provenance and clear licensing enabling long-term reuse and reproducibility.
We compile and organise all data generated by molecular dynamics simulations, making them accessible to drive new research.
Learn More →Establish a platform adhering to Findable, Accessible, Interoperable, and Reusable principles for molecular simulation data.
View Goals →A collaborative effort to create, establish, and sustain a database that allows findability, accessibility, interoperability, and reusability.
Get Involved →
Prof. Alberto Perez presented the vision behind MDDB America at ACS Spring 2026. The Florida Node is the first MDDB node in the America and approaching 1,000 projects.
Our inaugural conference brought together leading researchers from across the Americas.
A landmark article published in Nature Methods.
We recognise the need for a collaborative effort to create, establish, and sustain a database that allows findability, accessibility, interoperability, and reusability of molecular dynamics simulation data.
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